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microarrays: layouts
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Our microarrays are printed on UltraGAPS™ slides (Corning Inc.) using high-precision robotics. Printed arrays are processed following Corning's protocol and are ready-to-use.

Most of the quantification packages available for microarray analysis require certain parameters in order to provide grids to mark off spots. Below are the required specifications for all our arrays. Specifications of array layouts are defined based on the slide barcode located on the bottom of the scanned image.

Annotations on all arrays are subject to change. We recommend users update the latest annotations from the corresponding databases. The gene lists are available here.

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*Note - older H1.7k arrays (versions 1 to 3) have 12 rows and 20 columns (reversed).

Grid Rows Grid Cols Rows Cols Grid to Grid
Distance (um)
Spot to Spot
Distance (um)
SS-H19K 12 4 20 20 4500 200
H19K (A/B) 8 4 25 24 4500 170
H8K 12 4 12 16 4500 200
H10K 12 4 14 16 4500 200
H1.7K* 4 4 20 12 4500 200
H1.7Kv8 8 4 10 12 4500 200
HCGI12K 12 4 17 16 4500 200
HCGI8.1K 12 4 11 16 4500 200
M15K 12 4 25 26 4500 167
M7.4K 12 4 20 16 4500 200
M22.4K 12 4 20 24 4500 170
MCGI4.6K 12 4 7 16 4500 200
MCGI7.3K 12 4 10 16 4500 200
Y6.4K v1, v2 8 4 20 20 4500 200
Y6.4K v3.48, v4, v6, v7 12 4 17 16 4500 200